Stem-loop mze-mir-219a-2

Accession

MI0034178

Description

Metriaclima zebra mze-mir-219a-2 precursor miRNA

Sequence

2855 reads, 114.0 reads per million, 7 experiments

UGAUUGUCCAAACGCAAUUCUUGuauuuaauauccauauccaGGAGUUGUGGCUGGACAUCAUG
((((.(((((..(((((((((((.((...........)).)))))))))))..)))))))))..

Structure

--    U     AA           u  uuaa 
  UGAU GUCCA  CGCAAUUCUUG au    u
  |||| |||||  ||||||||||| ||    a
  ACUA CAGGU  GUGUUGAGGac ua    u
GU    -     CG           c  uacc 

Annotation confidence High

Genome context

AGTA03000034.1: 1018039-1018102 [-]

Mature mze-miR-219a-5p

• Accession: MIMAT0042393
• Description: Metriaclima zebra mze-miR-219a-5p mature miRNA
• Sequence: 1 - UGAUUGUCCAAACGCAAUUCUUG - 23
• Evidence: experimental ; Illumina [1]

Mature mze-miR-219a-2-3p

• Accession: MIMAT0060027
• Description: Metriaclima zebra mze-miR-219a-2-3p mature miRNA
• Sequence: 43 - GGAGUUGUGGCUGGACAUCAUG - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381