Stem-loop mze-mir-301b-2

Accession

MI0034180

Description

Metriaclima zebra mze-mir-301b-2 precursor miRNA

Sequence

3912 reads, 276.0 reads per million, 7 experiments

GCUUUGACGAUGUUGCACUACUguaucaucgcugaagCAGUGCAAUAGUAUUGUCAUAGC
(((.(((((((((((((((...((.(((....))).))))))))))...))))))).)))

Structure

   U       ---        ACU  a   u 
GCU UGACGAU   GUUGCACU   gu uca c
||| |||||||   ||||||||   || |||  
CGA ACUGUUA   UAACGUGA   Cg agu g
   U       UGA        ---  a   c 

Annotation confidence High

Genome context

AGTA03000008.1: 379433-379492 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mze-mir-301b-2

Mature mze-miR-301b-2-5p

• Accession: MIMAT0059961
• Description: Metriaclima zebra mze-miR-301b-2-5p mature miRNA
• Sequence: 1 - GCUUUGACGAUGUUGCACUACU - 22
• Evidence: experimental ; Illumina [1]

Mature mze-miR-301b-3p

• Accession: MIMAT0042324
• Description: Metriaclima zebra mze-miR-301b-3p mature miRNA
• Sequence: 38 - CAGUGCAAUAGUAUUGUCAUAGC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381