Stem-loop mze-mir-29a-1

Accession

MI0034204

Description

Metriaclima zebra mze-mir-29a-1 precursor miRNA

Sequence

46 reads, 3.0 reads per million, 7 experiments

ACCGUUUUCCUCUGGUGUUCAGAguuuccaucaugucUAGCACCAUUUGAAAUCGGUUA
((((.((((...(((((((.(((............))))))))))...)))).))))..

Structure

--    U    CUC       C   guuuc 
  ACCG UUUC   UGGUGUU AGA     c
  |||| ||||   ||||||| |||      
  UGGC AAAG   ACCACGA Ucu     a
AU    U    UUU       -   guacu 

Annotation confidence Not enough data

Genome context

AGTA03000042.1: 5123100-5123158 [-]

Mature mze-miR-29a-1-5p

• Accession: MIMAT0060024
• Description: Metriaclima zebra mze-miR-29a-1-5p mature miRNA
• Sequence: 1 - ACCGUUUUCCUCUGGUGUUCAGA - 23
• Evidence: experimental ; Illumina [1]

Mature mze-miR-29a-3p

• Accession: MIMAT0042392
• Description: Metriaclima zebra mze-miR-29a-3p mature miRNA
• Sequence: 38 - UAGCACCAUUUGAAAUCGGUUA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381