Stem-loop mze-mir-196b

Accession

MI0034220

Description

Metriaclima zebra mze-mir-196b precursor miRNA

Sequence

12902 reads, 422.0 reads per million, 7 experiments

UAGGUAGUCUCAUGUUGUUGGGCuauauuauuucucCCACAACACAAAACUGCCUUGA
.(((((((....((((((.(((.............)))))))))....)))))))...

Structure

--U       CUCA      U   Cuaua 
   AGGUAGU    UGUUGU GGG     u
   |||||||    |||||| |||     u
   UCCGUCA    ACAACA CCc     a
AGU       AAAC      -   ucuuu 

Annotation confidence High

Genome context

AGTA03000034.1: 1542507-1542564 [+]

Mature mze-miR-196b-5p

• Accession: MIMAT0042414
• Description: Metriaclima zebra mze-miR-196b-5p mature miRNA
• Sequence: 1 - UAGGUAGUCUCAUGUUGUUGGGC - 23
• Evidence: experimental ; Illumina [1]

Mature mze-miR-196b-3p

• Accession: MIMAT0060045
• Description: Metriaclima zebra mze-miR-196b-3p mature miRNA
• Sequence: 37 - CCACAACACAAAACUGCCUUGA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381