Stem-loop mze-mir-194b

Accession

MI0034221

Description

Metriaclima zebra mze-mir-194b precursor miRNA

Sequence

383 reads, 27.0 reads per million, 7 experiments

UGUAACAGCAUCUCCAUAUGGAaaaacuguggcuuCCAGUGGAGCUGCUGUUAUCUG
.(((((((((.((((((.(((((..........))))))))))).)))))))))...

Structure

--U         U      A     aaac 
   GUAACAGCA CUCCAU UGGAa    u
   ||||||||| |||||| |||||     
   UAUUGUCGU GAGGUG ACCuu    g
GUC         C      -     cggu 

Annotation confidence High

Genome context

AGTA03000037.1: 5169406-5169462 [+]

Mature mze-miR-194b-5p

• Accession: MIMAT0042415
• Description: Metriaclima zebra mze-miR-194b-5p mature miRNA
• Sequence: 1 - UGUAACAGCAUCUCCAUAUGGA - 22
• Evidence: experimental ; Illumina [1]

Mature mze-miR-194b-3p

• Accession: MIMAT0060046
• Description: Metriaclima zebra mze-miR-194b-3p mature miRNA
• Sequence: 36 - CCAGUGGAGCUGCUGUUAUCUG - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381