Stem-loop mze-mir-150

Accession

MI0034222

Description

Metriaclima zebra mze-mir-150 precursor miRNA

Sequence

317 reads, 24.0 reads per million, 7 experiments

ACUCCCAAUCCUUGUACCAGUGUCUugacaccagugaCGCUGGACGGGUUUUGGGGGGG
.(((((((..(((((.(((((((((((....))).)))))))))))))..)))))))..

Structure

-A       UC     A        -   a 
  CUCCCAA  CUUGU CCAGUGUC Uug c
  |||||||  ||||| |||||||| |||  
  GGGGGUU  GGGCA GGUCGCag gac a
GG       UU     -        u   c 

Annotation confidence High

Genome context

AGTA03000153.1: 397596-397654 [+]

Mature mze-miR-150-5p

• Accession: MIMAT0042416
• Description: Metriaclima zebra mze-miR-150-5p mature miRNA
• Sequence: 1 - ACUCCCAAUCCUUGUACCAGUGUCU - 25
• Evidence: experimental ; Illumina [1]

Mature mze-miR-150-3p

• Accession: MIMAT0060047
• Description: Metriaclima zebra mze-miR-150-3p mature miRNA
• Sequence: 38 - CGCUGGACGGGUUUUGGGGGGG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381