Stem-loop mze-mir-153c

Accession

MI0034227

Description

Metriaclima zebra mze-mir-153c precursor miRNA

Sequence

184 reads, 10.0 reads per million, 7 experiments

GUCAUUUUUGUGGUUUGCAGCUAGuacucuggcuccagUUGCAUAGUCAUAAAAAUGAGC
.((((((((((((((((((((((((......)))..))))))).))))))))))))))..

Structure

-G              -       --   ac 
  UCAUUUUUGUGGUU UGCAGCU  AGu  u
  |||||||||||||| |||||||  |||   
  AGUAAAAAUACUGA ACGUUga  ucg  c
CG              U       cc   gu 

Annotation confidence High

Genome context

AGTA03000086.1: 2754840-2754899 [-]

Mature mze-miR-153c-5p

• Accession: MIMAT0060052
• Description: Metriaclima zebra mze-miR-153c-5p mature miRNA
• Sequence: 1 - GUCAUUUUUGUGGUUUGCAGCUAG - 24
• Evidence: experimental ; Illumina [1]

Mature mze-miR-153c-3p

• Accession: MIMAT0042421
• Description: Metriaclima zebra mze-miR-153c-3p mature miRNA
• Sequence: 39 - UUGCAUAGUCAUAAAAAUGAGC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381