Stem-loop mze-mir-723a

Accession

MI0034230

Description

Metriaclima zebra mze-mir-723a precursor miRNA

Sequence

246 reads, 18.0 reads per million, 7 experiments

GGCAGCUUUGUGUGAUGUGACUUCugacauaucgaagaAGACAUCAGAUAAAUCUGUGCU
.((((.(((((.((((((..(((((..........))))))))))).))))).))))...

Structure

--G    C     G      GA     gaca 
   GCAG UUUGU UGAUGU  CUUCu    u
   |||| ||||| ||||||  |||||     
   UGUC AAAUA ACUACA  GAaga    a
UCG    U     G      --     agcu 

Annotation confidence High

Genome context

AGTA03000122.1: 850469-850528 [+]

Mature mze-miR-723a-5p

• Accession: MIMAT0060054
• Description: Metriaclima zebra mze-miR-723a-5p mature miRNA
• Sequence: 1 - GGCAGCUUUGUGUGAUGUGACUUC - 24
• Evidence: experimental ; Illumina [1]

Mature mze-miR-723a-3p

• Accession: MIMAT0042424
• Description: Metriaclima zebra mze-miR-723a-3p mature miRNA
• Sequence: 39 - AGACAUCAGAUAAAUCUGUGCU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381