Stem-loop nbr-mir-10a-1

Accession

MI0034272

Description

Neolamprologus brichardi nbr-mir-10a-1 precursor miRNA

Sequence

1779769 reads, 110031.0 reads per million, 7 experiments

UACCCUGUAGAACCGAAUUUGUgugaugaaaccagauucaCAGAUUCGAUUUUAGGGGAGU
...(((.(((((.((((((((((...((....))....)))))))))).))))).)))...

Structure

UAC   G     C          -uga  a 
   CCU UAGAA CGAAUUUGUg    ug a
   ||| ||||| ||||||||||    ||  
   GGG AUUUU GCUUAGACac    ac a
UGA   G     A          uuag  c 

Annotation confidence High

Genome context

JH422286.1: 7050678-7050738 [-]

Mature nbr-miR-10a-5p

• Accession: MIMAT0042465
• Description: Neolamprologus brichardi nbr-miR-10a-5p mature miRNA
• Sequence: 1 - UACCCUGUAGAACCGAAUUUGU - 22
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-10a-1-3p

• Accession: MIMAT0060076
• Description: Neolamprologus brichardi nbr-miR-10a-1-3p mature miRNA
• Sequence: 41 - CAGAUUCGAUUUUAGGGGAGU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381