Stem-loop nbr-mir-9-2

Accession

MI0034280

Description

Neolamprologus brichardi nbr-mir-9-2 precursor miRNA

Sequence

1843931 reads, 94167.0 reads per million, 7 experiments

UCUUUGGUUAUCUAGCUGUAUGaguuuuaauuucaUAAAGCUAGAGAACCGAAAGUA
..(((((((.(((((((.((((((.......)))))).))))))).)))))))....

Structure

--UC       A       G      uu 
    UUUGGUU UCUAGCU UAUGag  u
    ||||||| ||||||| ||||||  u
    AAGCCAA AGAUCGA AUacuu  a
AUGA       G       A      ua 

Annotation confidence High

Genome context

JH422283.1: 5552068-5552124 [+]

Mature nbr-miR-9-5p

• Accession: MIMAT0042470
• Description: Neolamprologus brichardi nbr-miR-9-5p mature miRNA
• Sequence: 1 - UCUUUGGUUAUCUAGCUGUAUG - 22
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-9-2-3p

• Accession: MIMAT0060083
• Description: Neolamprologus brichardi nbr-miR-9-2-3p mature miRNA
• Sequence: 36 - UAAAGCUAGAGAACCGAAAGUA - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381