Stem-loop nbr-mir-92a-2

Accession

MI0034282

Description

Neolamprologus brichardi nbr-mir-92a-2 precursor miRNA

Sequence

3992934 reads, 231507.0 reads per million, 7 experiments

AGGUGGGGAUAGGUAGCAAUGCUguguuccuccaggUAUUGCACUUGUCCCGGCCUGU
((((.(((((((((.((((((((..(.....)..))))))))))))))))).))))..

Structure

--    G         A        gu u 
  AGGU GGGAUAGGU GCAAUGCU  g u
  |||| ||||||||| ||||||||  | c
  UCCG CCCUGUUCA CGUUAUgg  c c
UG    G         -        ac u 

Annotation confidence High

Genome context

JH422273.1: 20859881-20859938 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from nbr-mir-92a-2

Mature nbr-miR-92a-2-5p

• Accession: MIMAT0060086
• Description: Neolamprologus brichardi nbr-miR-92a-2-5p mature miRNA
• Sequence: 1 - AGGUGGGGAUAGGUAGCAAUGCU - 23
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-92a-3p

• Accession: MIMAT0042471
• Description: Neolamprologus brichardi nbr-miR-92a-3p mature miRNA
• Sequence: 37 - UAUUGCACUUGUCCCGGCCUGU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381