Stem-loop nbr-mir-21-2

Accession

MI0034283

Description

Neolamprologus brichardi nbr-mir-21-2 precursor miRNA

Sequence

1185378 reads, 64306.0 reads per million, 7 experiments

UAGCUUAUCAGACUGGUGUUGGCuguuaagauugcaaggCGACAACAGUCUGUAGGCUGUC
(((((((.(((((((.(((((.((((.......)).)).))))).))))))))))))))..

Structure

--       U       G     G  -  ua 
  UAGCUUA CAGACUG UGUUG Cu gu  a
  ||||||| ||||||| ||||| || ||  g
  GUCGGAU GUCUGAC ACAGC ga cg  a
CU       -       A     g  a  uu 

Annotation confidence High

Genome context

JH422287.1: 199795-199855 [+]

Mature nbr-miR-21-5p

• Accession: MIMAT0042472
• Description: Neolamprologus brichardi nbr-miR-21-5p mature miRNA
• Sequence: 1 - UAGCUUAUCAGACUGGUGUUGGC - 23
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-21-2-3p

• Accession: MIMAT0060087
• Description: Neolamprologus brichardi nbr-miR-21-2-3p mature miRNA
• Sequence: 40 - CGACAACAGUCUGUAGGCUGUC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381