Stem-loop nbr-mir-9-5

Accession

MI0034287

Description

Neolamprologus brichardi nbr-mir-9-5 precursor miRNA

Sequence

1774744 reads, 90389.0 reads per million, 7 experiments

UCUUUGGUUAUCUAGCUGUAUGagugauaaucaugcaucAUAAAGCUAGAUAACCGAAAGu
..(((((((((((((((.(((((((((...))))...))))).)))))))))))))))...

Structure

-UC               G     ---    u 
   UUUGGUUAUCUAGCU UAUGa   guga  
   ||||||||||||||| |||||   |||| a
   AAGCCAAUAGAUCGA AUAcu   uacu  
uGA               A     acg    a 

Annotation confidence High

Genome context

JH422273.1: 14632557-14632617 [+]

Mature nbr-miR-9-5p

• Accession: MIMAT0042470
• Description: Neolamprologus brichardi nbr-miR-9-5p mature miRNA
• Sequence: 1 - UCUUUGGUUAUCUAGCUGUAUG - 22
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-9-3p

• Accession: MIMAT0060084
• Description: Neolamprologus brichardi nbr-miR-9-3p mature miRNA
• Sequence: 40 - AUAAAGCUAGAUAACCGAAAG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381