Stem-loop nbr-mir-204-2

Accession

MI0034290

Description

Neolamprologus brichardi nbr-mir-204-2 precursor miRNA

Sequence

55447 reads, 3155.0 reads per million, 7 experiments

UUCCCUUUGUCAUCCUAUGCCUggaacuuggauaagGCAGGGACAGCAAAGGGAUGC
.(((((((((..((((.(((((............)))))))))..)))))))))...

Structure

--U         CA    A     ggaac 
   UCCCUUUGU  UCCU UGCCU     u
   |||||||||  |||| |||||      
   AGGGAAACG  AGGG ACGga     u
CGU         AC    -     auagg 

Annotation confidence High

Genome context

JH422288.1: 2040339-2040395 [-]

Mature nbr-miR-204-5p

• Accession: MIMAT0042473
• Description: Neolamprologus brichardi nbr-miR-204-5p mature miRNA
• Sequence: 1 - UUCCCUUUGUCAUCCUAUGCCU - 22
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-204-2-3p

• Accession: MIMAT0060090
• Description: Neolamprologus brichardi nbr-miR-204-2-3p mature miRNA
• Sequence: 37 - GCAGGGACAGCAAAGGGAUGC - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381