Stem-loop nbr-mir-126

Accession

MI0034319

Description

Neolamprologus brichardi nbr-mir-126 precursor miRNA

Sequence

24674 reads, 1404.0 reads per million, 7 experiments

CAUUAUUACUUUUGGUACGCGcuaugccacucucaacUCGUACCGUGAGUAAUAAUGCA
(((((((((((.(((((((.(...............).))))))).)))))))))))..

Structure

--           U       C cuaugc 
  CAUUAUUACUU UGGUACG G      c
  ||||||||||| ||||||| |      a
  GUAAUAAUGAG GCCAUGC c      c
AC           U       U aacucu 

Annotation confidence High

Genome context

JH422319.1: 2690862-2690920 [-]

Mature nbr-miR-126-5p

• Accession: MIMAT0042489
• Description: Neolamprologus brichardi nbr-miR-126-5p mature miRNA
• Sequence: 1 - CAUUAUUACUUUUGGUACGCG - 21
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-126-3p

• Accession: MIMAT0060118
• Description: Neolamprologus brichardi nbr-miR-126-3p mature miRNA
• Sequence: 38 - UCGUACCGUGAGUAAUAAUGCA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381