Stem-loop nbr-mir-455

Accession

MI0034342

Description

Neolamprologus brichardi nbr-mir-455 precursor miRNA

Sequence

7900 reads, 459.0 reads per million, 7 experiments

UAUGUGCCCUUGGACUACAUCGuggaagccagcaccaUGCAGUCCAUGGGCAUAUACAC
(((((((((.((((((.(((.(((........))).))).)))))).)))))))))...

Structure

---         U      A   C   gaa 
   UAUGUGCCC UGGACU CAU Gug   g
   ||||||||| |||||| ||| |||    
   AUAUACGGG ACCUGA GUa cac   c
CAC         U      C   c   gac 

Annotation confidence High

Genome context

JH422319.1: 649925-649983 [+]

Mature nbr-miR-455-5p

• Accession: MIMAT0042506
• Description: Neolamprologus brichardi nbr-miR-455-5p mature miRNA
• Sequence: 1 - UAUGUGCCCUUGGACUACAUCG - 22
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-455-3p

• Accession: MIMAT0060140
• Description: Neolamprologus brichardi nbr-miR-455-3p mature miRNA
• Sequence: 38 - UGCAGUCCAUGGGCAUAUACAC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381