Stem-loop nbr-mir-138-2

Accession

MI0034373

Description

Neolamprologus brichardi nbr-mir-138-2 precursor miRNA

Sequence

AGCUGGUGUUGUGAAUCAGGCCGcugaaaugucacgcacggcuuuuucacaacaccagggu
..(((((((((((((..((((((((((....))).))..))))).)))))))))))))...

Structure

-AG             UC     --  -   a 
   CUGGUGUUGUGAA  AGGCC  Gc uga a
   |||||||||||||  |||||  || |||  
   gaccacaacacuu  uucgg  cg acu u
ugg             -u     ca  c   g 

Annotation confidence Not enough data

Genome context

JH422314.1: 4448435-4448495 [+]

Mature nbr-miR-138

• Accession: MIMAT0042529
• Description: Neolamprologus brichardi nbr-miR-138 mature miRNA
• Sequence: 1 - AGCUGGUGUUGUGAAUCAGGCCG - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381