Stem-loop nbr-let-7c

Accession

MI0034378

Description

Neolamprologus brichardi nbr-let-7c precursor miRNA

Sequence

UGAGGUAGUAGGUUGUAUGGUUuagaauuacacccugggaguuaacuguacaaccuucuagcuuucc
.(((.(((.(((((((((((((...(((..(......)..)))))))))))))))).))).)))...

Structure

--U   G   U             uag   ua ac 
   GAG UAG AGGUUGUAUGGUU   aau  c  c
   ||| ||| |||||||||||||   |||  |   
   uuc auc uccaacaugucaa   uug  g  c
ccu   g   u             ---   ag gu 

Annotation confidence Not enough data

Genome context

JH422457.1: 315204-315270 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from nbr-let-7c

Mature nbr-let-7c

• Accession: MIMAT0042532
• Description: Neolamprologus brichardi nbr-let-7c mature miRNA
• Sequence: 1 - UGAGGUAGUAGGUUGUAUGGUU - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381