Stem-loop nbr-mir-129-3

Accession

MI0034399

Description

Neolamprologus brichardi nbr-mir-129-3 precursor miRNA

Sequence

39611 reads, 2119.0 reads per million, 7 experiments

CUUUUUGCGGUCUGGGCUUGCugugcauacaugaaccugggAAGCCCUUACCCCAAAAAGCAU
(((((((.(((..((((((.((((.((....)).))..)).))))))..))).)))))))...

Structure

---       C   CU      G  --  g  u 
   CUUUUUG GGU  GGGCUU Cu  gu ca a
   ||||||| |||  |||||| ||  || ||  
   GAAAAAC CCA  CCCGAA gg  ca gu c
UAC       C   UU      g  uc  a  a 

Annotation confidence High

Genome context

JH422303.1: 2203580-2203642 [-]

Mature nbr-miR-129-5p

• Accession: MIMAT0042546
• Description: Neolamprologus brichardi nbr-miR-129-5p mature miRNA
• Sequence: 1 - CUUUUUGCGGUCUGGGCUUGC - 21
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-129-3p

• Accession: MIMAT0060182
• Description: Neolamprologus brichardi nbr-miR-129-3p mature miRNA
• Sequence: 42 - AAGCCCUUACCCCAAAAAGCAU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381