Stem-loop nbr-mir-7-1

Accession

MI0034401

Description

Neolamprologus brichardi nbr-mir-7-1 precursor miRNA

Sequence

27785 reads, 1484.0 reads per million, 7 experiments

UGGAAGACUAGUGAUUUUGUUGUuuuuaguuagagcaaccgaCAACAAAUCACAGUCUGCCAAA
(((.(((((.(((((((.((((((....((....))....)))))))))))))))))).)))..

Structure

--   A     A       U      uuua  u 
  UGG AGACU GUGAUUU GUUGUu    gu a
  ||| ||||| ||||||| ||||||    ||  
  ACC UCUGA CACUAAA CAACag    cg g
AA   G     -       -      ccaa  a 

Annotation confidence High

Genome context

JH422289.1: 1939955-1940018 [+]

Mature nbr-miR-7-5p

• Accession: MIMAT0042549
• Description: Neolamprologus brichardi nbr-miR-7-5p mature miRNA
• Sequence: 1 - UGGAAGACUAGUGAUUUUGUUGU - 23
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-7-1-3p

• Accession: MIMAT0060184
• Description: Neolamprologus brichardi nbr-miR-7-1-3p mature miRNA
• Sequence: 43 - CAACAAAUCACAGUCUGCCAAA - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381