Stem-loop nbr-mir-190a-1

Accession

MI0034410

Description

Neolamprologus brichardi nbr-mir-190a-1 precursor miRNA

Sequence

363 reads, 23.0 reads per million, 7 experiments

UGAUAUGUUUGAUAUAUUAGGUUGuuauucagucccaACUAUAUAUCAAACAUAUUCCU
.((((((((((((((((..(((((...........)))))))))))))))))))))...

Structure

--U                UA     uuau 
   GAUAUGUUUGAUAUAU  GGUUG    u
   ||||||||||||||||  |||||    c
   UUAUACAAACUAUAUA  UCAac    a
UCC                --     ccug 

Annotation confidence High

Genome context

JH422273.1: 9843765-9843823 [-]

Mature nbr-miR-190a-5p

• Accession: MIMAT0042554
• Description: Neolamprologus brichardi nbr-miR-190a-5p mature miRNA
• Sequence: 1 - UGAUAUGUUUGAUAUAUUAGGUUG - 24
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-190a-3p

• Accession: MIMAT0060190
• Description: Neolamprologus brichardi nbr-miR-190a-3p mature miRNA
• Sequence: 38 - ACUAUAUAUCAAACAUAUUCCU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381