Stem-loop nbr-mir-187

Accession

MI0034421

Description

Neolamprologus brichardi nbr-mir-187 precursor miRNA

Sequence

2201 reads, 120.0 reads per million, 7 experiments

GGCUGCAACACAGGACAUGGGuccugccucuccuccccgcUCGUGUCUUGUGUUGCAGCCAGU
((((((((((((((((((((((................))))))))))))))))))))))...

Structure

---                      ccugccu 
   GGCUGCAACACAGGACAUGGGu       c
   ||||||||||||||||||||||        
   CCGACGUUGUGUUCUGUGCUcg       u
UGA                      ccccucc 

Annotation confidence High

Genome context

JH422285.1: 3676856-3676918 [-]

Mature nbr-miR-187-5p

• Accession: MIMAT0060199
• Description: Neolamprologus brichardi nbr-miR-187-5p mature miRNA
• Sequence: 1 - GGCUGCAACACAGGACAUGGG - 21
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-187-3p

• Accession: MIMAT0042563
• Description: Neolamprologus brichardi nbr-miR-187-3p mature miRNA
• Sequence: 41 - UCGUGUCUUGUGUUGCAGCCAGU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381