Stem-loop nbr-mir-124-6

Accession

MI0034440

Description

Neolamprologus brichardi nbr-mir-124-6 precursor miRNA

Sequence

4005 reads, 258.0 reads per million, 7 experiments

aGUGUUCACAGUGGACCUUGAUUuaaaaucagucaauUAAGGCACGCGGUGAAUGCC
.((((((((.(((..((((((((...........))))))))..))).)))))))).

Structure

a        A   GA        uaaa 
 GUGUUCAC GUG  CCUUGAUU    a
 |||||||| |||  ||||||||    u
 CGUAAGUG CGC  GGAAUuaa    c
C        G   AC        cuga 

Annotation confidence High

Genome context

JH422515.1: 6966-7022 [+]

Mature nbr-miR-124-6-5p

• Accession: MIMAT0060212
• Description: Neolamprologus brichardi nbr-miR-124-6-5p mature miRNA
• Sequence: 2 - GUGUUCACAGUGGACCUUGAUU - 23
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-124-3p

• Accession: MIMAT0042577
• Description: Neolamprologus brichardi nbr-miR-124-3p mature miRNA
• Sequence: 38 - UAAGGCACGCGGUGAAUGCC - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381