Stem-loop nbr-mir-23a-3

Accession

MI0034441

Description

Neolamprologus brichardi nbr-mir-23a-3 precursor miRNA

Sequence

3699 reads, 214.0 reads per million, 7 experiments

gGGAUUCCUGGCAGAGUGAUUUgguugugauguaauguaaAUCACAUUGCCAGGGAUUUCCA
((((((((((((((.((((((((((((.....)))).)))))))).))))))))))))))..

Structure

--              A        -    u 
  gGGAUUCCUGGCAG GUGAUUUg guug g
  |||||||||||||| |||||||| |||| a
  CUUUAGGGACCGUU CACUAaau uaau u
AC              A        g    g 

Annotation confidence High

Genome context

JH422296.1: 729641-729702 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from nbr-mir-23a-3

Mature nbr-miR-23a-3-5p

• Accession: MIMAT0060210
• Description: Neolamprologus brichardi nbr-miR-23a-3-5p mature miRNA
• Sequence: 2 - GGAUUCCUGGCAGAGUGAUUU - 22
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-23a-3p

• Accession: MIMAT0042542
• Description: Neolamprologus brichardi nbr-miR-23a-3p mature miRNA
• Sequence: 41 - AUCACAUUGCCAGGGAUUUCCA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381