Stem-loop nbr-mir-218a-2

Accession

MI0034442

Description

Neolamprologus brichardi nbr-mir-218a-2 precursor miRNA

Sequence

16379 reads, 964.0 reads per million, 7 experiments

UUGUGCUUGAUCUAACCAUGUGgccccgccuacuguaacaucacaugguuccgucaagcgccagg
..(((((((((..((((((((((....((.....))....))))))))))..)))))))))....

Structure

--UU         CU          cccc  c 
    GUGCUUGAU  AACCAUGUGg    gc u
    |||||||||  ||||||||||    || a
    cgcgaacug  uugguacacu    ug c
ggac         cc          acaa  u 

Annotation confidence Not enough data

Genome context

JH422398.1: 378023-378087 [-]

Mature nbr-miR-218a-5p

• Accession: MIMAT0042575
• Description: Neolamprologus brichardi nbr-miR-218a-5p mature miRNA
• Sequence: 1 - UUGUGCUUGAUCUAACCAUGUG - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381