Stem-loop nbr-mir-124-4

Accession

MI0034454

Description

Neolamprologus brichardi nbr-mir-124-4 precursor miRNA

Sequence

4946 reads, 313.0 reads per million, 7 experiments

UGUGUUCACAGUGGACCUUGAUUuaauuucaauacaauUAAGGCACGCGGUGAAUGCC
.((((((((.(((..((((((((............))))))))..))).)))))))).

Structure

U        A   GA        uaauu 
 GUGUUCAC GUG  CCUUGAUU     u
 |||||||| |||  ||||||||      
 CGUAAGUG CGC  GGAAUuaa     c
C        G   AC        cauaa 

Annotation confidence High

Genome context

JH422329.1: 3201047-3201104 [-]

Mature nbr-miR-124-4-5p

• Accession: MIMAT0060215
• Description: Neolamprologus brichardi nbr-miR-124-4-5p mature miRNA
• Sequence: 1 - UGUGUUCACAGUGGACCUUGAUU - 23
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-124-3p

• Accession: MIMAT0042577
• Description: Neolamprologus brichardi nbr-miR-124-3p mature miRNA
• Sequence: 39 - UAAGGCACGCGGUGAAUGCC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381