miRBase entry: nbr-mir-734

Stem-loop nbr-mir-734


Accession
MI0034470
Description
Neolamprologus brichardi nbr-mir-734 precursor miRNA


Sequence

889 reads, 54.0 reads per million, 7 experiments
UGAACUAUUCUGCAACAUUUGUUGaugugguucugcaagUAAAUGCUGCAGAAUUGUGCUC
...((.((((((((.(((((((((...........))).)))))).)))))))).))....

Structure
-UGA  U        A      -   augu 
    AC AUUCUGCA CAUUUG UUG    g
    || |||||||| |||||| |||    g
    UG UAAGACGU GUAAAU aac    u
CUCG  U        C      g   gucu 


Annotation confidence High
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Genome context
JH422363.1: 1996675-1996735 [+]

Database links

Mature nbr-miR-734-5p

Accession MIMAT0060225
Description Neolamprologus brichardi nbr-miR-734-5p mature miRNA
Sequence 1 - UGAACUAUUCUGCAACAUUUGUUG - 24
Evidence experimental
Illumina [1]

Mature nbr-miR-734-3p

Accession MIMAT0042591
Description Neolamprologus brichardi nbr-miR-734-3p mature miRNA
Sequence 40 - UAAAUGCUGCAGAAUUGUGCUC - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381