Stem-loop nbr-mir-150

Accession

MI0034478

Description

Neolamprologus brichardi nbr-mir-150 precursor miRNA

Literature search

1 open access papers mention nbr-mir-150
(1 sentences)

Sequence

305 reads, 19.0 reads per million, 7 experiments

ACUCCCAAUCCUUGUACCAGUGUCUugacaccagugaCGCUGGACGGGUUUUGGGGGGG
.(((((((..(((((.(((((((((((....))).)))))))))))))..)))))))..

Structure

-A       UC     A        -   a 
  CUCCCAA  CUUGU CCAGUGUC Uug c
  |||||||  ||||| |||||||| |||  
  GGGGGUU  GGGCA GGUCGCag gac a
GG       UU     -        u   c 

Annotation confidence High

Genome context

JH422406.1: 347640-347698 [+]

Mature nbr-miR-150-5p

• Accession: MIMAT0042598
• Description: Neolamprologus brichardi nbr-miR-150-5p mature miRNA
• Sequence: 1 - ACUCCCAAUCCUUGUACCAGUGUCU - 25
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-150-3p

• Accession: MIMAT0060232
• Description: Neolamprologus brichardi nbr-miR-150-3p mature miRNA
• Sequence: 38 - CGCUGGACGGGUUUUGGGGGGG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381