Stem-loop nbr-mir-147

Accession

MI0034492

Description

Neolamprologus brichardi nbr-mir-147 precursor miRNA

Sequence

97 reads, 5.0 reads per million, 7 experiments

acagaaucguuucugcacaaacuaggacgcuuugacacucaGUGUGCGGAAAUGCUUCUGCUC
.(((((.((((((((((((....((............))...)))))))))))).)))))...

Structure

--a     u            aacu  gacgc 
   cagaa cguuucugcaca    ag     u
   ||||| ||||||||||||    ||      
   GUCUU GUAAAGGCGUGU    uc     u
CUC     C            -Gac  acagu 

Annotation confidence Not enough data

Genome context

JH422303.1: 5230645-5230707 [-]

Mature nbr-miR-147-3p

• Accession: MIMAT0042613
• Description: Neolamprologus brichardi nbr-miR-147-3p mature miRNA
• Sequence: 42 - GUGUGCGGAAAUGCUUCUGCUC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381