Stem-loop nbr-mir-29c

Accession

MI0034507

Description

Neolamprologus brichardi nbr-mir-29c precursor miRNA

Literature search

1 open access papers mention nbr-mir-29c
(1 sentences)

Sequence

314 reads, 16.0 reads per million, 7 experiments

ACUGAUUUCUUCUGGUGCUUAGAgcccgcugaagccuucUAGCACCAUUUGAAAUCGGUUA
(((((((((...(((((((.((((...((....)).)))))))))))...)))))))))..

Structure

--         UUC       U    ccc  u 
  ACUGAUUUC   UGGUGCU AGAg   gc g
  |||||||||   ||||||| ||||   ||  
  UGGCUAAAG   ACCACGA Ucuu   cg a
AU         UUU       -    --c  a 

Annotation confidence High

Genome context

JH422436.1: 831013-831073 [+]

Mature nbr-miR-29c-5p

• Accession: MIMAT0042631
• Description: Neolamprologus brichardi nbr-miR-29c-5p mature miRNA
• Sequence: 1 - ACUGAUUUCUUCUGGUGCUUAGA - 23
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-29c-3p

• Accession: MIMAT0060248
• Description: Neolamprologus brichardi nbr-miR-29c-3p mature miRNA
• Sequence: 40 - UAGCACCAUUUGAAAUCGGUUA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381