Stem-loop nbr-mir-7147

Accession

MI0034512

Description

Neolamprologus brichardi nbr-mir-7147 precursor miRNA

Sequence

238 reads, 14.0 reads per million, 7 experiments

UGUACCAUGCUGGUAGCCAGUGugugguaggcuuugcUGGUGACCAGCGUUGUGCCUC
.((((.((((((((.(((((((.((.....))..))))))).)))))))).))))...

Structure

--U    C        A       -u  g 
   GUAC AUGCUGGU GCCAGUG  gu g
   |||| |||||||| |||||||  || u
   CGUG UGCGACCA UGGUcgu  cg a
CUC    U        G       uu  g 

Annotation confidence High

Genome context

JH422308.1: 1933188-1933245 [+]

Mature nbr-miR-7147-5p

• Accession: MIMAT0042636
• Description: Neolamprologus brichardi nbr-miR-7147-5p mature miRNA
• Sequence: 1 - UGUACCAUGCUGGUAGCCAGUG - 22
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-7147-3p

• Accession: MIMAT0060250
• Description: Neolamprologus brichardi nbr-miR-7147-3p mature miRNA
• Sequence: 38 - UGGUGACCAGCGUUGUGCCUC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381