Stem-loop oni-mir-10576

Accession

MI0034781

Description

Oreochromis niloticus oni-mir-10576 precursor miRNA

Sequence

21766 reads, 24.0 reads per million, 106 experiments

UGUAGAGCAGACUGGAUUCUCUgucucccuuuuuagaacggAGGAUCUUUUUUGCUCUGCAGU
(((((((((((..(((((((((((((........)).)))))))))))..)))))))))))..

Structure

--           CU           -  ccc 
  UGUAGAGCAGA  GGAUUCUCUgu cu   u
  |||||||||||  ||||||||||| ||    
  ACGUCUCGUUU  UCUAGGAggca ga   u
UG           UU           a  uuu 

Annotation confidence High

Genome context

CM001451.1: 20205566-20205628 [+]

Mature oni-miR-10576-5p

• Accession: MIMAT0042843
• Description: Oreochromis niloticus oni-miR-10576-5p mature miRNA
• Sequence: 1 - UGUAGAGCAGACUGGAUUCUCU - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10576-3p

• Accession: MIMAT0059512
• Description: Oreochromis niloticus oni-miR-10576-3p mature miRNA
• Sequence: 42 - AGGAUCUUUUUUGCUCUGCAGU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381