Stem-loop pny-mir-10a-2

Accession

MI0034791

Description

Pundamilia nyererei pny-mir-10a-2 precursor miRNA

Sequence

1561662 reads, 113779.0 reads per million, 7 experiments

UACCCUGUAGAACCGAAUUUGUgugaaguacaagcagucgCAAAUACGUCUCUACAGGAAUA
...((((((((..((.(((((((....((....))...))))))).))..))))))))....

Structure

-UAC        AC  A       ugaa  a 
    CCUGUAGA  CG AUUUGUg    gu c
    ||||||||  || |||||||    ||  
    GGACAUCU  GC UAAACgc    cg a
AUAA        CU  A       -uga  a 

Annotation confidence High

Genome context

JH419252.1: 1926893-1926954 [-]

Mature pny-miR-10a-5p

• Accession: MIMAT0042852
• Description: Pundamilia nyererei pny-miR-10a-5p mature miRNA
• Sequence: 1 - UACCCUGUAGAACCGAAUUUGU - 22
• Evidence: experimental ; Illumina [1]

Mature pny-miR-10a-2-3p

• Accession: MIMAT0060255
• Description: Pundamilia nyererei pny-miR-10a-2-3p mature miRNA
• Sequence: 41 - CAAAUACGUCUCUACAGGAAUA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381