Stem-loop pny-mir-26a-2

Accession

MI0034811

Description

Pundamilia nyererei pny-mir-26a-2 precursor miRNA

Sequence

171347 reads, 14589.0 reads per million, 7 experiments

UUCAAGUAAUCCAGGAUAGGCUguguguauccuggauggCCUAUUCGUGAUUACUUGCACU
..(((((((((..(((((((((((.(.......).)))))))))))..)))))))))....

Structure

--UU         CA           g gu 
    CAAGUAAUC  GGAUAGGCUgu u  a
    |||||||||  ||||||||||| |  u
    GUUCAUUAG  CUUAUCCggua g  c
UCAC         UG           g uc 

Annotation confidence High

Genome context

AFNX01065441.1: 1284-1344 [+]

Mature pny-miR-26a-5p

• Accession: MIMAT0042865
• Description: Pundamilia nyererei pny-miR-26a-5p mature miRNA
• Sequence: 1 - UUCAAGUAAUCCAGGAUAGGCU - 22
• Evidence: experimental ; Illumina [1]

Mature pny-miR-26a-2-3p

• Accession: MIMAT0060274
• Description: Pundamilia nyererei pny-miR-26a-2-3p mature miRNA
• Sequence: 40 - CCUAUUCGUGAUUACUUGCACU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381