Stem-loop pny-mir-199-4

Accession

MI0034816

Description

Pundamilia nyererei pny-mir-199-4 precursor miRNA

Sequence

cccaguguucagacuaccuguucaucaggcugcagcugaACAGUAGUCUGCACAUUGGUU
.(((((((.((((((((.((((((.(........).)))))))))))))).)))))))..

Structure

-c       u        c      u agg 
  ccagugu cagacuac uguuca c   c
  ||||||| |||||||| |||||| |    
  GGUUACA GUCUGAUG ACAagu g   u
UU       C        -      c acg 

Annotation confidence Not enough data

Genome context

JH419363.1: 469374-469433 [+]

Mature pny-miR-199

• Accession: MIMAT0042866
• Description: Pundamilia nyererei pny-miR-199 mature miRNA
• Sequence: 40 - ACAGUAGUCUGCACAUUGGUU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381