Stem-loop pny-let-7g-2

Accession

MI0034844

Description

Pundamilia nyererei pny-let-7g-2 precursor miRNA

Sequence

104515 reads, 9064.0 reads per million, 7 experiments

UGAGGUAGUAGUUUGUAUAGUUuuaggaucacaccagaucugggagauaaCUAUACAGCCUACUGUCUUUCU
.((((((((((.((((((((((...(((((......))))).......)))))))))).))))))))))...

Structure

--U          U          ----uua     ac 
   GAGGUAGUAG UUGUAUAGUU       ggauc  a
   |||||||||| ||||||||||       |||||   
   UUCUGUCAUC GACAUAUCaa       ucuag  c
UCU          C          uagaggg     ac 

Annotation confidence Not enough data

Genome context

JH419311.1: 2201684-2201755 [+]

Mature pny-let-7g-5p

• Accession: MIMAT0042883
• Description: Pundamilia nyererei pny-let-7g-5p mature miRNA
• Sequence: 1 - UGAGGUAGUAGUUUGUAUAGUU - 22
• Evidence: experimental ; Illumina [1]

Mature pny-let-7g-2-3p

• Accession: MIMAT0060304
• Description: Pundamilia nyererei pny-let-7g-2-3p mature miRNA
• Sequence: 51 - CUAUACAGCCUACUGUCUUUCU - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381