Stem-loop pny-mir-122

Accession

MI0034859

Description

Pundamilia nyererei pny-mir-122 precursor miRNA

Sequence

314940 reads, 27403.0 reads per million, 7 experiments

UGGAGUGUGACAAUGGUGUUUGuuuccuuuucgucaAACGCCAUUAUCACACUAAAUA
...(((((((.(((((((((((............))))))))))).))))))).....

Structure

--UGG       C           uuucc 
     AGUGUGA AAUGGUGUUUG     u
     ||||||| |||||||||||      
     UCACACU UUACCGCAAac     u
AUAAA       A           ugcuu 

Annotation confidence High

Genome context

JH419207.1: 7537021-7537078 [-]

Mature pny-miR-122-5p

• Accession: MIMAT0042894
• Description: Pundamilia nyererei pny-miR-122-5p mature miRNA
• Sequence: 1 - UGGAGUGUGACAAUGGUGUUUG - 22
• Evidence: experimental ; Illumina [1]

Mature pny-miR-122-3p

• Accession: MIMAT0060318
• Description: Pundamilia nyererei pny-miR-122-3p mature miRNA
• Sequence: 37 - AACGCCAUUAUCACACUAAAUA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381