Stem-loop pny-mir-124-1

Accession

MI0034863

Description

Pundamilia nyererei pny-mir-124-1 precursor miRNA

Sequence

4366 reads, 362.0 reads per million, 7 experiments

CGUGUUCACAGCGGACCUUGAUUuaaugucuuacaauUAAGGCACGCGGUGAAUGCCA
.((((((((.(((..(((((((((((....))).))))))))..))).))))))))..

Structure

-C        A   GA        -   u 
  GUGUUCAC GCG  CCUUGAUU uaa g
  |||||||| |||  |||||||| |||  
  CGUAAGUG CGC  GGAAUuaa auu u
AC        G   AC        c   c 

Annotation confidence High

Genome context

JH419212.1: 4887370-4887427 [-]

Mature pny-miR-124-5p

• Accession: MIMAT0060319
• Description: Pundamilia nyererei pny-miR-124-5p mature miRNA
• Sequence: 1 - CGUGUUCACAGCGGACCUUGAUU - 23
• Evidence: experimental ; Illumina [1]

Mature pny-miR-124-3p

• Accession: MIMAT0042896
• Description: Pundamilia nyererei pny-miR-124-3p mature miRNA
• Sequence: 38 - UAAGGCACGCGGUGAAUGCCA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381