Stem-loop pny-mir-124-3

Accession

MI0034865

Description

Pundamilia nyererei pny-mir-124-3 precursor miRNA

Sequence

4363 reads, 362.0 reads per million, 7 experiments

CGUGUUCACAGCGGACCUUGAUUuaauguccauacaauUAAGGCACGCGGUGAAUGCCA
.((((((((.(((..((((((((............))))))))..))).))))))))..

Structure

-C        A   GA        uaaug 
  GUGUUCAC GCG  CCUUGAUU     u
  |||||||| |||  ||||||||      
  CGUAAGUG CGC  GGAAUuaa     c
AC        G   AC        cauac 

Annotation confidence High

Genome context

JH419305.1: 1311272-1311330 [-]

Mature pny-miR-124-5p

• Accession: MIMAT0060319
• Description: Pundamilia nyererei pny-miR-124-5p mature miRNA
• Sequence: 1 - CGUGUUCACAGCGGACCUUGAUU - 23
• Evidence: experimental ; Illumina [1]

Mature pny-miR-124-3p

• Accession: MIMAT0042896
• Description: Pundamilia nyererei pny-miR-124-3p mature miRNA
• Sequence: 39 - UAAGGCACGCGGUGAAUGCCA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381