Stem-loop pny-mir-206

Accession

MI0034866

Description

Pundamilia nyererei pny-mir-206 precursor miRNA

Sequence

501306 reads, 43903.0 reads per million, 7 experiments

ACAUGCUUCCUUAUAUCCCCAUAuuaauacgccacuuaUGGAAUGUAAGGAAGUGUGUGG
((((((((((((((((..(((((.............))))).))))))))))))))))..

Structure

--                CC     uuaau 
  ACAUGCUUCCUUAUAU  CCAUA     a
  ||||||||||||||||  |||||     c
  UGUGUGAAGGAAUGUA  GGUau     g
GG                -A     ucacc 

Annotation confidence High

Genome context

JH419263.1: 437135-437194 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pny-mir-206

Mature pny-miR-206-5p

• Accession: MIMAT0060323
• Description: Pundamilia nyererei pny-miR-206-5p mature miRNA
• Sequence: 1 - ACAUGCUUCCUUAUAUCCCCAUA - 23
• Evidence: experimental ; Illumina [1]

Mature pny-miR-206-3p

• Accession: MIMAT0042897
• Description: Pundamilia nyererei pny-miR-206-3p mature miRNA
• Sequence: 39 - UGGAAUGUAAGGAAGUGUGUGG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381