Stem-loop pny-mir-489

Accession

MI0034919

Description

Pundamilia nyererei pny-mir-489 precursor miRNA

Sequence

1428 reads, 121.0 reads per million, 7 experiments

uggucguauguaugacgucauuuacuucaaugcuuggagUGACAUCAUAUGUACGGCUGCU
.((((((((((((((.(((....(((((((...)))))))))).))))))))))))))...

Structure

--u              c   auuu       u 
   ggucguauguauga guc    acuucaa  
   |||||||||||||| |||    ||||||| g
   UCGGCAUGUAUACU CAG    Ugagguu  
UCG              A   ----       c 

Annotation confidence Not enough data

Genome context

JH419235.1: 303076-303136 [-]

Mature pny-miR-489-3p

• Accession: MIMAT0042939
• Description: Pundamilia nyererei pny-miR-489-3p mature miRNA
• Sequence: 40 - UGACAUCAUAUGUACGGCUGCU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381