Stem-loop pny-mir-7-2

Accession

MI0034923

Description

Pundamilia nyererei pny-mir-7-2 precursor miRNA

Sequence

23826 reads, 2037.0 reads per million, 7 experiments

UGGAAGACUAGUGAUUUUGUUGUuguaaauucauguuuuugacAACAGAGUCACAGUCUACCUCG
.((.(((((.(((((((((((((((.((((....)))).)))))))))))))))))))).))...

Structure

--U  A     A               u    u 
   GG AGACU GUGAUUUUGUUGUug aaau c
   || ||||| ||||||||||||||| ||||  
   CC UCUGA CACUGAGACAAcagu uuug a
GCU  A     -               u    u 

Annotation confidence High

Genome context

JH419519.1: 124405-124469 [-]

Mature pny-miR-7-5p

• Accession: MIMAT0042937
• Description: Pundamilia nyererei pny-miR-7-5p mature miRNA
• Sequence: 1 - UGGAAGACUAGUGAUUUUGUUGU - 23
• Evidence: experimental ; Illumina [1]

Mature pny-miR-7-2-3p

• Accession: MIMAT0060364
• Description: Pundamilia nyererei pny-miR-7-2-3p mature miRNA
• Sequence: 44 - AACAGAGUCACAGUCUACCUCG - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381