Stem-loop pny-mir-190a-1

Accession

MI0034925

Description

Pundamilia nyererei pny-mir-190a-1 precursor miRNA

Sequence

236 reads, 17.0 reads per million, 7 experiments

UGAUAUGUUUGAUAUAUUAGGUUGuuauucagucccaacuauauaucaaacauauuccu
.((((((((((((((((..(((((...........)))))))))))))))))))))...

Structure

--U                UA     uuau 
   GAUAUGUUUGAUAUAU  GGUUG    u
   ||||||||||||||||  |||||    c
   uuauacaaacuauaua  ucaac    a
ucc                --     ccug 

Annotation confidence Not enough data

Genome context

JH419256.1: 2842178-2842236 [+]

Mature pny-miR-190a-5p

• Accession: MIMAT0042941
• Description: Pundamilia nyererei pny-miR-190a-5p mature miRNA
• Sequence: 1 - UGAUAUGUUUGAUAUAUUAGGUUG - 24
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381