Stem-loop pny-mir-365

Accession

MI0034935

Description

Pundamilia nyererei pny-mir-365 precursor miRNA

Sequence

799 reads, 70.0 reads per million, 7 experiments

AGGGACUUUUAGGGGCAGCUGUGuuuuauuaacccagucaUAAUGCCCCUAAAAAUCCUUAU
(((((.(((((((((((((((.(((.....))).)))).....))))))))))).)))))..

Structure

--     C           -----    U   u 
  AGGGA UUUUAGGGGCA     GCUG Guu u
  ||||| |||||||||||     |||| ||| a
  UUCCU AAAAUCCCCGU     ugac caa u
UA     A           AAUac    c   u 

Annotation confidence High

Genome context

JH419439.1: 511836-511897 [-]

Mature pny-miR-365-5p

• Accession: MIMAT0060377
• Description: Pundamilia nyererei pny-miR-365-5p mature miRNA
• Sequence: 1 - AGGGACUUUUAGGGGCAGCUGUG - 23
• Evidence: experimental ; Illumina [1]

Mature pny-miR-365-3p

• Accession: MIMAT0042948
• Description: Pundamilia nyererei pny-miR-365-3p mature miRNA
• Sequence: 41 - UAAUGCCCCUAAAAAUCCUUAU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381