Stem-loop pny-mir-22b

Accession

MI0034943

Description

Pundamilia nyererei pny-mir-22b precursor miRNA

Sequence

83606 reads, 7359.0 reads per million, 7 experiments

AGUUCUUCACUGGCAAGCUUUAuguuucuguacacaugcuaAAGCUGCCAGCUGAAGAACU
(((((((((((((((.((((((.((............)))))))))))))).)))))))))

Structure

         -      A      u  uucug 
AGUUCUUCA CUGGCA GCUUUA gu     u
||||||||| |||||| |||||| ||      
UCAAGAAGU GACCGU CGAAau cg     a
         C      -      -  uacac 

Annotation confidence High

Genome context

JH419231.1: 4710232-4710292 [-]

Mature pny-miR-22b-5p

• Accession: MIMAT0060384
• Description: Pundamilia nyererei pny-miR-22b-5p mature miRNA
• Sequence: 1 - AGUUCUUCACUGGCAAGCUUUA - 22
• Evidence: experimental ; Illumina [1]

Mature pny-miR-22b-3p

• Accession: MIMAT0042956
• Description: Pundamilia nyererei pny-miR-22b-3p mature miRNA
• Sequence: 42 - AAGCUGCCAGCUGAAGAACU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381