Stem-loop pny-mir-205-2

Accession

MI0034956

Description

Pundamilia nyererei pny-mir-205-2 precursor miRNA

Sequence

199743 reads, 17313.0 reads per million, 7 experiments

UCCUUCAUUCCACCGGAGUCUGuaucuguauuugaccagaUUUCAGUGGUGUGAAGUGUAAG
..((((((.((((.((((((((..((.......)).)))))))).)))).))))))......

Structure

----UC      U    C        ua  ug 
      CUUCAU CCAC GGAGUCUG  uc  u
      |||||| |||| ||||||||  ||  a
      GAAGUG GGUG CUUUagac  ag  u
GAAUGU      U    A        -c  uu 

Annotation confidence High

Genome context

JH419440.1: 416501-416562 [-]

Mature pny-miR-205-5p

• Accession: MIMAT0042873
• Description: Pundamilia nyererei pny-miR-205-5p mature miRNA
• Sequence: 1 - UCCUUCAUUCCACCGGAGUCUG - 22
• Evidence: experimental ; Illumina [1]

Mature pny-miR-205-2-3p

• Accession: MIMAT0060290
• Description: Pundamilia nyererei pny-miR-205-2-3p mature miRNA
• Sequence: 41 - UUUCAGUGGUGUGAAGUGUAAG - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381