Stem-loop pny-mir-101b

Accession

MI0034990

Description

Pundamilia nyererei pny-mir-101b precursor miRNA

Sequence

400 reads, 33.0 reads per million, 7 experiments

CAGUUAUCAUGGUACCGGUGCUGUgucccucucaagUACAGUACUAUGAUAACUGAA
(((((((((((((((..(((((............))))).)))))))))))))))..

Structure

--               CG     GUguc 
  CAGUUAUCAUGGUAC  GUGCU     c
  |||||||||||||||  |||||      
  GUCAAUAGUAUCAUG  CAUga     c
AA               -A     acucu 

Annotation confidence High

Genome context

JH419237.1: 3892282-3892338 [+]

Mature pny-miR-101b-5p

• Accession: MIMAT0042985
• Description: Pundamilia nyererei pny-miR-101b-5p mature miRNA
• Sequence: 1 - CAGUUAUCAUGGUACCGGUGCUGU - 24
• Evidence: experimental ; Illumina [1]

Mature pny-miR-101b-3p

• Accession: MIMAT0060400
• Description: Pundamilia nyererei pny-miR-101b-3p mature miRNA
• Sequence: 37 - UACAGUACUAUGAUAACUGAA - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381