Stem-loop pny-mir-7147

Accession

MI0035029

Description

Pundamilia nyererei pny-mir-7147 precursor miRNA

Sequence

209 reads, 18.0 reads per million, 7 experiments

UGUACCAUGCUGGUAGCCAGUGugugguaggcuuugCUGGUGACCAGCGUUGUGCCUC
.((((.((((((((.(((((((.((.....))..))))))).)))))))).))))...

Structure

--U    C        A       -u  g 
   GUAC AUGCUGGU GCCAGUG  gu g
   |||| |||||||| |||||||  || u
   CGUG UGCGACCA UGGUCgu  cg a
CUC    U        G       uu  g 

Annotation confidence High

Genome context

JH419292.1: 1331793-1331850 [-]

Mature pny-miR-7147-5p

• Accession: MIMAT0043026
• Description: Pundamilia nyererei pny-miR-7147-5p mature miRNA
• Sequence: 1 - UGUACCAUGCUGGUAGCCAGUG - 22
• Evidence: experimental ; Illumina [1]

Mature pny-miR-7147-3p

• Accession: MIMAT0060419
• Description: Pundamilia nyererei pny-miR-7147-3p mature miRNA
• Sequence: 37 - CUGGUGACCAGCGUUGUGCCUC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381