Stem-loop oni-mir-430a

Accession

MI0035042

Description

Oreochromis niloticus oni-mir-430a precursor miRNA

Literature search

1 open access papers mention oni-mir-430a
(1 sentences)

Sequence

4135 reads, 46.0 reads per million, 41 experiments

ACAAGAACAUAAGUACUUAUUUuaauucugaauacagUAAGUGCUCAUUGUUGUUGUGU
((((.((((..((((((((((.((........)).))))))))))...)))).))))..

Structure

--    G    -UA          U  auu 
  ACAA AACA   AGUACUUAUU ua   c
  |||| ||||   |||||||||| ||    
  UGUU UUGU   UCGUGAAUga au   u
UG    G    UAC          c  aag 

Annotation confidence High

Genome context

CM001456.1: 8210267-8210325 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-430a

Mature oni-miR-430a-5p

• Accession: MIMAT0059520
• Description: Oreochromis niloticus oni-miR-430a-5p mature miRNA
• Sequence: 1 - ACAAGAACAUAAGUACUUAUUU - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-430a-3p

• Accession: MIMAT0043038
• Description: Oreochromis niloticus oni-miR-430a-3p mature miRNA
• Sequence: 38 - UAAGUGCUCAUUGUUGUUGUGU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774