Stem-loop oni-mir-8160b

Accession

MI0035045

Description

Oreochromis niloticus oni-mir-8160b precursor miRNA

Sequence

84228 reads, 69.0 reads per million, 95 experiments

AGAAUAAUGCCAGCAGUCGGUCguggugucccagggaCCAGCACUGGUGUUAUUGAGA
..(((((((((((..((.((((.(((....)))..)))).)).)))))))))))....

Structure

--AG           CA  C    -g   u 
    AAUAAUGCCAG  GU GGUC  ugg g
    |||||||||||  || ||||  |||  
    UUAUUGUGGUC  CG CCag  acc u
AGAG           -A  A    gg   c 

Annotation confidence High

Genome context

CM001463.1: 20399592-20399649 [+]

Mature oni-miR-8160b-5p

• Accession: MIMAT0043040
• Description: Oreochromis niloticus oni-miR-8160b-5p mature miRNA
• Sequence: 1 - AGAAUAAUGCCAGCAGUCGGUC - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-8160b-3p

• Accession: MIMAT0059522
• Description: Oreochromis niloticus oni-miR-8160b-3p mature miRNA
• Sequence: 38 - CCAGCACUGGUGUUAUUGAGA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774